000 02482nam a22003017a 4500
003 KOHA
005 20231103122052.0
008 231103d2023 cy ||||| m||| 00| 0 eng d
040 _aCY-NiCIU
_beng
_cCY-NiCIU
_erda
041 _aeng
090 _aYL 3117
_bA46 2023
100 1 _aAfolabi, Gbolahan Salam
245 1 0 _aDNA SEQUENCE ANALYSIS BASED ON DNABIT ALGORITHM
_cGBOLAHAN SALAM AFOLABI; SUPERVISOR: PROF. DR. AHMET ADALIER
264 _c2023
300 _aviii, 71 sheets;
_c31 cm.
_e1 CD-ROM
336 _2rdacontent
_atext
_btxt
337 _2rdamedia
_aunmediated
_bn
338 _2rdacarrier
_avolume
_bnc
502 _aThesis (MSc) - Cyprus International University. Institute of Graduate Studies and Research Information Technologies Department
504 _aIncludes bibliography (sheets 46-50)
520 _aABSTRACT The amount of DNA data changes globally in different data banks. DNA datasets get bigger because more of them are being collected. Two significant problems result from the difficulty of keeping huge DNA data sets: the amount of space needed to store these data sets and the amount of time needed to encode and decode them. Algorithms for encryption, decryption and compression have been developed in order to store and process DNA data effectively. DNA compression entails utilizing fewer bits than the original representation to encode information. This thesis introduces a DNA sequence compression approach based on the DNABIT algorithm. By evaluating the pre-defined protein sequences and replacing them with a Binary entity, the compression method decreases the characters in a DNA sequence. This study was carried out utilizing DNA information from the National Center for Biotechnology Information (NCBI). We were able to achieve an average compression ratio of 0.797, average space saving percentage of 80% within a minimal compression time. The DNA sequence of any living organism, virus or bacteria can therefore be easily determined with the use of this type of compression of DNA sequences. Keywords: Algorithm, Binary, Bit, Byte, Conversion, Compression, Decryption, DNA, Encryption, Patterns, Repetitive, Sequence.
650 0 _aAlgorithms
_vDissertations, Academic
650 0 _aConversion
_vDissertations, Academic
650 0 _aData compression (Computer science)
_vDissertations, Academic
650 0 _aDNA
_vDissertations, Academic
700 1 _aAdalıer, Ahmet
942 _2ddc
_cTS
999 _c291646
_d291646